Friday, October 20, 2023

Human Challenge Study Design in Action - a Dengue Fever vaccine trial

A human challenge study, also known as a controlled human infection model (CHIM), is a type of clinical research study in which healthy volunteers are intentionally exposed to a specific pathogen (such as a virus, bacterium, or parasite) under controlled conditions. The primary goal of these studies is to better understand the pathogen's behavior, the human immune response to it, and to test the effectiveness of potential treatments, vaccines, or preventive measures. Human challenge studies can provide valuable insights into disease progression, immunity, and treatment efficacy in a controlled and ethical manner.

These studies are typically conducted under strict ethical and safety guidelines to minimize the risk to participants. Participants are closely monitored, and their informed consent is obtained. Human challenge studies have been used to study a variety of diseases, including influenza, malaria, Dengue fever, and COVID-19, among others. They play a crucial role in advancing medical and scientific knowledge and can accelerate the development of treatments and vaccines.

A human challenge study was mentioned as an alternative clinical trial design at the beginning of the COVID-19 pandemic when the world was desperate to find an effective and safe vaccine. I wrote an article about this: "Human Challenge Study Design for Covid-19 Vaccine Clinical Trials?"

Just this morning, Janssen Announces Promising Antiviral Activity Against Dengue in a Phase 2a Human Challenge Model. The results were from a phase 2a study titled "A Phase 2a, Randomized, Double-blind, Placebo Controlled Trial to Evaluate the Antiviral Activity, Safety, and Pharmacokinetics of Repeated Oral Doses of JNJ-64281802 Against Dengue Serotype 3 Infection in a Dengue Human Challenge Model in Healthy Adult Participants" that was posted on clinicaltrials.gov. Unfortunately, the clinical trial registration did not contain any description of the 'Challenge' part (i.e., how the healthy volunteers are exposed to the infectious agents (in this case, the Dengue virus). We will just need to wait for the formal publication of the study to know the details. 

In a paper by Porter et al "A human Phase I/IIa malaria challenge trial of a polyprotein malaria vaccine", the whole details about the human challenge study including the 'challenge' part were discussed. The 'sporozoite challenge' to the healthy volunteers was described below: 

 

Friday, October 13, 2023

Drugs Approved by FDA Despite Failed Trials or Minimal/Insufficient Data

I have been trying to collect the cases of that drugs were approved by the FDA despite the failed trials or minimal/insufficient data. For drugs treating rare diseases or diseases with unmet medical needs, the FDA may apply flexibility in approving the drug with loosened criteria. 

For diseases with clearly unmet medical needs such as ALS (Amyotrophic Lateral Sclerosis) and Alzheimer's disease, FDA officials have recently emphasized the urgent need for new treatments and pledged to use maximum "regulatory flexibility" when reviewing the NDA/BLA packages. By applying the maximum "regulatory flexibility", FDA has approved some drugs which do not meet the agency's traditional approval standards. Some of the approvals are really controversial and make me wonder if there is any boundary for the maximum "regulatory flexibility". 

The following paper on BioSpace.com listed six drugs that earned FDA approval without substantial evidence of effectiveness.

6 Drugs Approved Despite Failed Trials or Minimal Data
  • Ipsen’s Sohonos (palovarotene) for the ultra-rare genetic disease fibrodysplasia ossificans progressive (FOP)
  • Sarepta’s Elevidys as the first gene therapy for Duchenne muscular dystrophy (DMD)
  • Biogen's Qalsody (tofersen) to treat patients with superoxide dismutase 1 (SOD1)-ALS, a rare subtype of the fatal neurodegenerative disease
  • Biogen and Eisai got the nod for Aduhelm (aducanumab) for Alzheimer's diease,
  • Jazz Pharmaceuticals and PharmaMar’s Zepzelca (lurbinectedin) for small cell lung cancer (SCLC) that had progressed on or after platinum-based chemotherapy
  • Acadia Pharmaceuticals’ Nuplazid (pimavanserin) to treat hallucinations and delusions associated with psychosis in Parkinson’s disease.
Some of the approvals gave the sponsors the false hope that an innovative drug could be approved by the FDA even if the study failed to demonstrate the effectiveness as long as the drug was for the treatment of diseases with urgent unmet medical needs. A recent story about BrainStorm's ALS drug is exactly the case about this. 

Friday, October 06, 2023

MCID (Minimum Clinical Important Difference) for 6MWD - how low can we go?

I went back to watch the FDA CRDAC (Cardiovascular and Renal Drugs Advisory Committee) meeting to discuss Alnylam's drug Patisiran for the treatment of ATTR-CM (Transthyretin Amyloidosis) - a rare form of heart disease. The meeting discussion was centered on the clinical meaningfulness of the efficacy measures in the primary efficacy endpoint of 6MWD (how many meters patients can walk in 6 minutes) and the secondary endpoint of KCCQ - a patient-reported quality of life measure. 

The sponsor, Alnylam, conducted a phase III study called "APOLLO-B: A Study to Evaluate Patisiran in Participants With Transthyretin Amyloidosis With Cardiomyopathy (ATTR Amyloidosis With Cardiomyopathy)". The study results showed statistically significant differences in 6MWD and in KCCQ total score. However, the magnitude of the treatment differences was very small: 14.7 meters in 6MWD and 3.7 points in KCCQ at month 12.

To judge if the treatment difference is clinically meaningful, people will compare the magnitude of the treatment differences from the study with the MCID (minimal clinically important difference). MCID. MCID is the smallest change in a treatment outcome that individual patients would identify as important and which would indicate a change in the patients' management.  The MCID is a patient-centered concept that captures both the magnitude of the improvement and the value patients place on the change.  In other words, the MCID is the smallest amount of change in the score of a scale recognized by the patient without considering the side effects and cost. 

In FDA's briefing book for CRADAC meeting, FDA casted doubts about the Patisiram's efficacy: 
The 6MWT, a performance outcome (PerfO), is a practical simple test that measures the distance that a patient can quickly walk on a flat, hard surface in a period of 6 minutes (the 6MWD). It evaluates the global and integrated responses of all the systems involved during exercise. The results of the APOLLO-B trial showed a statistically significant but small treatment effect for the primary efficacy endpoint. Subjects treated with patisiran experienced an average decrease in their 6MWD of 13 m at Month 12 from an average 6MWD of 361 m at baseline, while subjects in the placebo arm experienced an average decrease in their 6MWD of 31 m at Month 12 from an average 6MWD of 375 m at baseline. The change from baseline at Month 12 in 6MWT (Hodges-Lehmann [HL] estimate of median difference) for patisiran vs. placebo was 14.7 m (95% confidence interval [CI] 0.7, 28.7; p-value 0.04). Literature has reported a range of meaningful differences (22 to 90 m) reflective of the heterogeneity in cardiomyopathy patients (Mathai et al. 2012; Shoemaker et al. 2012).
 The KCCQ, a patient-reported outcome (PRO) and a disease-specific measure for HF, is a 23-item self-administered questionnaire developed to measure the patient’s perception of their health status, which includes heart failure symptoms, impact on physical and social function, and how heart failure impacts their quality of life (QOL) within a 2-week recall period. The KCCQ-OSS has a 0-100 transformed score range where higher scores reflect better health status (based on the Physical Limitation, Symptom Frequency, Symptom Burden, Quality of Life and Social Limitations Domain Scores). In the APOLLO-B trial,the treatment effect for the first secondary efficacy endpoint, change from baseline at Month 12 in KCCQ-OSS was small (3.7 points on a 0 to 100 transformed score range; 95% CI 0.2, 7.2; p-value 0.04). On average, subjects treated with patisiran had an increase in KCCQ-OSS of 0.3 points at Month 12 from the average baseline score of 69.8 points, while subjects in the placebo arm had a decrease in KCCQ-OSS of 3.4 points at Month 12 from the average baseline score of 70.3 points.  

Sponsor, Alnyam's briefing book and presentation spent a lot of effort to defend that the small, but statistically significant treatment differences are clinically meaningful. 


Sponsor attempted to derive an MCID using KCCQ category as an anchor based on the data from the study itself (APOLLO-B study). 


Not surprisingly, the MCID they generated were much smaller (MCID in the range of 7 - 8 meters) than the MCIDs reported in the literature. If the MCID is indeed in the range of 7 - 8 meters, the 14.7 meters (treatment difference observed in Apollo-B study) would be clinically meaningful. 



During the FDA advisory committee meeting, most of the members were not convinced by sponsor's presentation to defend the clinical meaningfulness of  small treatment difference in 6MWD (about 14 meter). However, majority of them (9-3) still voted in favor of the Patisiran's efficacy and the benefit-risk profile. 

Pfizer's tafamidis is the only approved drug for the treatment of ATTR-CM. According to the product label, the treatment difference in 6MWD was much larger - 76 meters with 95% confidence interval 58, 94 meters at month 30. 

For the same 6MWD, the MCID may be different depending on the treating diseases, different patient population, whether patients receiving the background therapies,... However, a treatment difference of 14 meters is still not a convincing number to be clinical meaningful. Putting on the relative scale, the 14 meters in patients with baseline 6MWD 361 meter is less than 5%. It is difficult to convince people a treatment difference less than 5% is clinically meaningful. 

I am particularlly interested in the MCID of 6MWD in lung diseases (especially the pulmonary arterial hypertension). 

Anne E. Holland (2014) "An official European Respiratory Society/American Thoracic Society technical standard: field walking tests in chronic respiratory disease" stated
“Available evidence suggests a minimal important difference (MID) of 30 m for the 6MWD in adults with chronic respiratory disease.”
Jude Moutchia (2023) "Minimal Clinically Important Difference in the 6-minute-walk Distance for Patients with Pulmonary Arterial Hypertension" found:
The minimal clinically important difference in the derivation sample was 33 meters (95% confidence interval, 27–38), which was almost identical to that in the validation sample (36 m [95% confidence interval, 29–43]). The minimal clinically important difference did not differ by age, sex, race, pulmonary hypertension etiology, body mass index, use of background therapy, or World Health Organization functional class.

Here is a table containing some literatures with estimated MCID. The MCID was found to be in the range of 20 - 54 meters depending on the indication/disease. 

Study/Article

Indication/Disease

MCID Range

MCID Midpoint

Chan (2015)

ARF

20 – 30

25

du Bois (2011)

IPF

24 – 45

35

Gilbert (2009)

PAH

41

41

Granger (2015)

Lung Cancer

22 – 42

32

Holland (2009)

DPLD/IPF

29 – 34

32

Holland (2010)

COPD

25

25

Mathai (2012)

PAH

33

33

Nathan (2015)

IPF

22 – 37

30

Polkey (2013)

COPD

30

30

Puhan (2008)

COPD

35

35

Puhan (2011)

COPD

24 – 28

26

Redelmeier (1997)

CLD

54

54

Swigris (2010)

IPF

28

28


Latest update: 

In the end, the FDA did not approve Patisiran for the treatment of ATTR-CM  because the treatment difference in 6MWD was too small (way below the MCID)  and not clinically meaningful even though the FDA advisory committee voted in favor of the Patisiran's benefit and there was no issue with the safety and the manufacturing. 

Alnylam Announces Receipt of Complete Response Letter from U.S. FDA for Supplemental New Drug Application for Patisiran for the Treatment of the Cardiomyopathy of ATTR Amyloidosis

 "In its Complete Response Letter (CRL), the regulator said that Alnylam had not provided enough evidence of the therapy’s benefit in the proposed indication. At the same time, the FDA did not flag any problems with patisiran’s clinical safety, drug quality, manufacturing processes or study conduct.

“The CRL indicated that the clinical meaningfulness of patisiran’s treatment effects for the cardiomyopathy of ATTR amyloidosis had not been established,” according to the company’s announcement. In light of the rejection, Alnylam will no long work toward an expanded label for Onpattro in the U.S."